Bacterial diversity in Fez tanneries and Morocco's Binlamdoune River, using 16S RNA gene based fingerprinting.
Identifieur interne : 000123 ( Main/Exploration ); précédent : 000122; suivant : 000124Bacterial diversity in Fez tanneries and Morocco's Binlamdoune River, using 16S RNA gene based fingerprinting.
Auteurs : Adil Essahale [Maroc] ; Moustafa Malki ; Irma Marín ; Mohieddine MoumniSource :
- Journal of environmental sciences (China) [ 1001-0742 ] ; 2010.
Descripteurs français
- KwdFr :
- ARN ribosomique 16S (MeSH), Animaux (MeSH), Bactéries (génétique), Banque de gènes (MeSH), Biodiversité (MeSH), Columbidae (MeSH), Déchets industriels (MeSH), Fèces (microbiologie), Maroc (MeSH), Microbiologie de l'eau (MeSH), Microscopie électronique à balayage (MeSH), Profilage d'ADN (MeSH), Rivières (microbiologie), Tannage (MeSH), Électrophorèse sur gel en gradient dénaturant (MeSH).
- MESH :
- Wicri :
- geographic : Maroc.
English descriptors
- KwdEn :
- Animals (MeSH), Bacteria (genetics), Biodiversity (MeSH), Columbidae (MeSH), DNA Fingerprinting (MeSH), Denaturing Gradient Gel Electrophoresis (MeSH), Feces (microbiology), Gene Library (MeSH), Industrial Waste (MeSH), Microscopy, Electron, Scanning (MeSH), Morocco (MeSH), RNA, Ribosomal, 16S (MeSH), Rivers (microbiology), Tanning (MeSH), Water Microbiology (MeSH).
- MESH :
- chemical : Industrial Waste, RNA, Ribosomal, 16S.
- geographic : Morocco.
- genetics : Bacteria.
- microbiology : Feces, Rivers.
- Animals, Biodiversity, Columbidae, DNA Fingerprinting, Denaturing Gradient Gel Electrophoresis, Gene Library, Microscopy, Electron, Scanning, Tanning, Water Microbiology.
Abstract
Tannery wastewater causes serious ecological and sanitary damage. Chemical analysis of water from Binlamdoune River of the medina of Fez was conducted and the results revealed the presence of toxic elements from tanneries and other industrial activities, which strongly affected water quality. To determine the effectiveness of bioremediation for depollution, we studied the abundance and diversity of bacteria residing in these polluted environments. Conducting denaturing gradient gel electrophoresis (PCR-DGGE) of the 16S rDNA area using primers related to bacteria showed a bacterial community belonging to eubacterial groups, that is, Epsilonproteobacteria, Clostridia, Lactobacillales, Bacteroidetes, Gammaproteobacteria, and Alphaproteobacteria. In addition, cloning displayed the presence of clones belonging to the Firmicutes group. Moreover, scanning electron microscopy revealed a significant heterogeneity of microorganism forms and structures. These endogenous microbes could have a significant role in the purification of Binlamdoune River and Fez tannery wastewater.
DOI: 10.1016/s1001-0742(09)60344-2
PubMed: 21462714
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 000722
- to stream PubMed, to step Curation: 000718
- to stream PubMed, to step Checkpoint: 000717
- to stream Main, to step Merge: 000123
- to stream Main, to step Curation: 000123
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Bacterial diversity in Fez tanneries and Morocco's Binlamdoune River, using 16S RNA gene based fingerprinting.</title><author><name sortKey="Essahale, Adil" sort="Essahale, Adil" uniqKey="Essahale A" first="Adil" last="Essahale">Adil Essahale</name><affiliation wicri:level="1"><nlm:affiliation>Moulay Ismaïl University, Faculty of Science, Department of Biology, BP 11 201 Zitoune, Meknès 50000, Morocco. essahale704@yahoo.fr</nlm:affiliation><country xml:lang="fr">Maroc</country><wicri:regionArea>Moulay Ismaïl University, Faculty of Science, Department of Biology, BP 11 201 Zitoune, Meknès 50000</wicri:regionArea><wicri:noRegion>Meknès 50000</wicri:noRegion></affiliation></author><author><name sortKey="Malki, Moustafa" sort="Malki, Moustafa" uniqKey="Malki M" first="Moustafa" last="Malki">Moustafa Malki</name></author><author><name sortKey="Marin, Irma" sort="Marin, Irma" uniqKey="Marin I" first="Irma" last="Marín">Irma Marín</name></author><author><name sortKey="Moumni, Mohieddine" sort="Moumni, Mohieddine" uniqKey="Moumni M" first="Mohieddine" last="Moumni">Mohieddine Moumni</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2010">2010</date><idno type="RBID">pubmed:21462714</idno><idno type="pmid">21462714</idno><idno type="doi">10.1016/s1001-0742(09)60344-2</idno><idno type="wicri:Area/PubMed/Corpus">000722</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000722</idno><idno type="wicri:Area/PubMed/Curation">000718</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000718</idno><idno type="wicri:Area/PubMed/Checkpoint">000717</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000717</idno><idno type="wicri:Area/Main/Merge">000123</idno><idno type="wicri:Area/Main/Curation">000123</idno><idno type="wicri:Area/Main/Exploration">000123</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Bacterial diversity in Fez tanneries and Morocco's Binlamdoune River, using 16S RNA gene based fingerprinting.</title><author><name sortKey="Essahale, Adil" sort="Essahale, Adil" uniqKey="Essahale A" first="Adil" last="Essahale">Adil Essahale</name><affiliation wicri:level="1"><nlm:affiliation>Moulay Ismaïl University, Faculty of Science, Department of Biology, BP 11 201 Zitoune, Meknès 50000, Morocco. essahale704@yahoo.fr</nlm:affiliation><country xml:lang="fr">Maroc</country><wicri:regionArea>Moulay Ismaïl University, Faculty of Science, Department of Biology, BP 11 201 Zitoune, Meknès 50000</wicri:regionArea><wicri:noRegion>Meknès 50000</wicri:noRegion></affiliation></author><author><name sortKey="Malki, Moustafa" sort="Malki, Moustafa" uniqKey="Malki M" first="Moustafa" last="Malki">Moustafa Malki</name></author><author><name sortKey="Marin, Irma" sort="Marin, Irma" uniqKey="Marin I" first="Irma" last="Marín">Irma Marín</name></author><author><name sortKey="Moumni, Mohieddine" sort="Moumni, Mohieddine" uniqKey="Moumni M" first="Mohieddine" last="Moumni">Mohieddine Moumni</name></author></analytic><series><title level="j">Journal of environmental sciences (China)</title><idno type="ISSN">1001-0742</idno><imprint><date when="2010" type="published">2010</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term><term>Bacteria (genetics)</term><term>Biodiversity (MeSH)</term><term>Columbidae (MeSH)</term><term>DNA Fingerprinting (MeSH)</term><term>Denaturing Gradient Gel Electrophoresis (MeSH)</term><term>Feces (microbiology)</term><term>Gene Library (MeSH)</term><term>Industrial Waste (MeSH)</term><term>Microscopy, Electron, Scanning (MeSH)</term><term>Morocco (MeSH)</term><term>RNA, Ribosomal, 16S (MeSH)</term><term>Rivers (microbiology)</term><term>Tanning (MeSH)</term><term>Water Microbiology (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN ribosomique 16S (MeSH)</term><term>Animaux (MeSH)</term><term>Bactéries (génétique)</term><term>Banque de gènes (MeSH)</term><term>Biodiversité (MeSH)</term><term>Columbidae (MeSH)</term><term>Déchets industriels (MeSH)</term><term>Fèces (microbiologie)</term><term>Maroc (MeSH)</term><term>Microbiologie de l'eau (MeSH)</term><term>Microscopie électronique à balayage (MeSH)</term><term>Profilage d'ADN (MeSH)</term><term>Rivières (microbiologie)</term><term>Tannage (MeSH)</term><term>Électrophorèse sur gel en gradient dénaturant (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Industrial Waste</term><term>RNA, Ribosomal, 16S</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Morocco</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Bacteria</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Bactéries</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Fèces</term><term>Rivières</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Feces</term><term>Rivers</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Biodiversity</term><term>Columbidae</term><term>DNA Fingerprinting</term><term>Denaturing Gradient Gel Electrophoresis</term><term>Gene Library</term><term>Microscopy, Electron, Scanning</term><term>Tanning</term><term>Water Microbiology</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>ARN ribosomique 16S</term><term>Animaux</term><term>Banque de gènes</term><term>Biodiversité</term><term>Columbidae</term><term>Déchets industriels</term><term>Maroc</term><term>Microbiologie de l'eau</term><term>Microscopie électronique à balayage</term><term>Profilage d'ADN</term><term>Tannage</term><term>Électrophorèse sur gel en gradient dénaturant</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Maroc</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Tannery wastewater causes serious ecological and sanitary damage. Chemical analysis of water from Binlamdoune River of the medina of Fez was conducted and the results revealed the presence of toxic elements from tanneries and other industrial activities, which strongly affected water quality. To determine the effectiveness of bioremediation for depollution, we studied the abundance and diversity of bacteria residing in these polluted environments. Conducting denaturing gradient gel electrophoresis (PCR-DGGE) of the 16S rDNA area using primers related to bacteria showed a bacterial community belonging to eubacterial groups, that is, Epsilonproteobacteria, Clostridia, Lactobacillales, Bacteroidetes, Gammaproteobacteria, and Alphaproteobacteria. In addition, cloning displayed the presence of clones belonging to the Firmicutes group. Moreover, scanning electron microscopy revealed a significant heterogeneity of microorganism forms and structures. These endogenous microbes could have a significant role in the purification of Binlamdoune River and Fez tannery wastewater.</div></front></TEI><affiliations><list><country><li>Maroc</li></country></list><tree><noCountry><name sortKey="Malki, Moustafa" sort="Malki, Moustafa" uniqKey="Malki M" first="Moustafa" last="Malki">Moustafa Malki</name><name sortKey="Marin, Irma" sort="Marin, Irma" uniqKey="Marin I" first="Irma" last="Marín">Irma Marín</name><name sortKey="Moumni, Mohieddine" sort="Moumni, Mohieddine" uniqKey="Moumni M" first="Mohieddine" last="Moumni">Mohieddine Moumni</name></noCountry><country name="Maroc"><noRegion><name sortKey="Essahale, Adil" sort="Essahale, Adil" uniqKey="Essahale A" first="Adil" last="Essahale">Adil Essahale</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Wicri/Sante/explor/MaghrebDataLibMedV2/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000123 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000123 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Wicri/Sante
|area= MaghrebDataLibMedV2
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:21462714
|texte= Bacterial diversity in Fez tanneries and Morocco's Binlamdoune River, using 16S RNA gene based fingerprinting.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:21462714" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a MaghrebDataLibMedV2
| This area was generated with Dilib version V0.6.38. |  |